Joint QC plot from a CellQc object — joint_plot_sc.CellQc • bixverse.plots

Joint QC plot from a CellQc object

Usage

# S3 method for class 'CellQc'
joint_plot_sc(
  x,
  library_size = "log10_lib_size",
  nb_features = "log10_nnz",
  palette = c("sequential", "spectral", "viridis", "diverging"),
  ...
)

Arguments

x: A CellQc object.
library_size: Character. Column with the library size per cell.
nb_features: Character. Column with the number of features per cell.
palette: String. Continuous palette for the hexbin fill. One of c("sequential", "spectral", "viridis", "diverging"), see bx_colors().
...: Ignored.

Value

A ggExtraPlot object.