Joint QC plot from a data.table — joint_plot_sc.data.table • bixverse.plots

Joint QC plot from a data.table

Usage

# S3 method for class 'data.table'
joint_plot_sc(
  x,
  library_size = "lib_size",
  nb_features = "nnz",
  log_scale = FALSE,
  palette = c("sequential", "spectral", "viridis", "diverging"),
  ...
)

Arguments

x: data.table. Input data containing the QC metrics.
library_size: Character. Column with the library size per cell.
nb_features: Character. Column with the number of features per cell.
log_scale: Logical. Log10-transform both axes (default: FALSE).
palette: String. Continuous palette for the hexbin fill. One of c("sequential", "spectral", "viridis", "diverging"), see bx_colors().
...: Ignored.

Value

A ggExtraPlot object.