UMAP implementation — rs_umap • manifoldsR

This is the wrapper function into the Rust interface for UMAP.

Usage

rs_umap(embd, n_dim, min_dist, spread, k, umap_params, seed, verbose)

embd: Numerical matrix. The data to use to generate the embeddings. Should be of dimensions samples x features.
n_dim: Integer. Number of UMAP dimensions to return.
min_dist: Numeric. Minimum distance to use.
spread: Numeric. Spread parameter to use.
k: Integer. Number of nearest neighbours to consider
umap_params: Named list. List that contains all of the key parameters for the UMAP generation.
seed: Integer. Seed for reproducibility.
verbose: Boolean. Controls verbosity of the function.

The UMAP embeddings.