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Get k-means centroids from a fast cluster result

get_centroids_sc.Rd

Get k-means centroids from a fast cluster result

Usage

get_centroids_sc(x)

# S3 method for class 'SingleCellFastClusters'
get_centroids_sc(x)

Arguments

x

SingleCellFastClusters object.

Examples

# the k-means centroids the graph clustering was built on
sc <- demo_single_cells()
res <- fast_cluster_sc(
  sc,
  resolutions = 1.0,
  n_centroids = 30L,
  return_kmeans = TRUE,
  .verbose = FALSE
)
dim(get_centroids_sc(res))
#> [1] 30 10

unlink(sc@dir_data, recursive = TRUE, force = TRUE)