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Get differential correlation-based graph

get_diffcor_graph.Rd

Helper function to get a differential correlation-based igraph from the class

Usage

get_diffcor_graph(object, min_cor = 0.2, fdr_threshold = 0.05, .verbose = TRUE)

Arguments

object

The class, see BulkCoExp().

min_cor

Float. The minimum absolute correlation that needs to be present in either data set.

fdr_threshold

Float. The maximum FDR that is tolerated for the generation of the graph.

.verbose

Boolean. Controls the verbosity of the function.

Value

A list with the following elements:

  • graph - The igraph

  • params - A list that contains the parameters of the graph generation and general graph information (node, edge numbers).