Wrapper function to load and process the gene ontology data. — get_go_data_human • bixverse

This function loads in gene ontology data stored in the package and processes it into the format for GeneOntologyElim(). Wraps load_go_human_data() and process_go_data() into one.

Usage

get_go_data_human(filter_relationships = TRUE, .verbose = TRUE)

Arguments

filter_relationships: Boolean. Shall the ontology be filtered to only "is_a" and "part_of" relationships. Defaults to TRUE.
.verbose: Boolean. Controls verbosity of the function.

Value

A data.table

Examples

# \donttest{
# human GO data ready for GeneOntologyElim()
go_dt <- get_go_data_human(.verbose = FALSE)
dim(go_dt)
#> [1] 18841     6
# }