Wrapper function to generate GSEA parameters
params_gsea.RdWrapper function to generate GSEA parameters
Usage
params_gsea(
min_size = 5L,
max_size = 500L,
gsea_param = 1,
sample_size = 101L,
eps = 1e-50
)Arguments
- min_size
Integer. Minimum number of genes per gene set.
- max_size
Integer. Maximum number of genes per gene set.
- gsea_param
Float. GSEA parameter. Defaults to
1.0.- sample_size
Integer. Number of samples to iterate through for the multi-level implementation of fgsea.
- eps
Float. Boundary for calculating the p-value. Used for the multi- level implementation of fgsea.