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Helper function to generate HVG defaults

Usage

params_hvg_defaults()

Value

A list with default parameters for kNN searches. Following parameters:

  • min_gene_var_pctl - Which percentile of the highly variable genes to include. Defaults to 0.7.

  • hvg_method - Which method to use to identify HVG. Defaults to "vst".

  • loess_span - In case of

  • clip_max -