Wrapper function to generate QC metric params for single cell
params_sc_min_quality.RdWrapper function to generate QC metric params for single cell
Usage
params_sc_min_quality(
min_unique_genes = 100L,
min_lib_size = 250L,
min_cells = 10L,
target_size = 10000
)Arguments
- min_unique_genes
Integer. Minimum number of unique genes per cell/spot to be included.
- min_lib_size
Integer. Minimum library size per cell/spot to be included.
- min_cells
Integer. Minimum number of cells a gene has to be expressed to be included.
- target_size
Float. The target size for the normalisation. Defaults to
1e4.