![[Experimental]](figures/lifecycle-experimental.svg)
edgeR's cpm on a plain count matrix, via the edge-rs crate.
Usage
rs_cpm(counts, lib_size, log, prior_count)
Arguments
- counts
Integer or double matrix. Raw counts of genes x samples.
- lib_size
Numeric vector or NULL. Library size per sample, e.g.
lib.size * norm.factors. NULL uses the column sums.
- log
Boolean. Return log2-CPM.
- prior_count
Numeric. Prior count added before the log. Ignored if
log = FALSE.
Value
Numeric matrix of (log2-)CPM values, genes x samples.
