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Prepare a pathway list for GSVA

rs_prepare_gsva_gs.Rd

[Experimental]

Usage

rs_prepare_gsva_gs(feature_names, pathway_list, min_size, max_size)

Arguments

feature_names

String vector. The feature names of the matrix (should be the rows).

pathway_list

List. A list containing the pathways and the respective genes

min_size, max_size

Integer. The minimum and maximum size respectively.

Value

Returns a named list with the sorted, 0-based indices of the pathways whose size (after matching to feature_names) is within [min_size, max_size].