Helper function to write data to h5ad format

This is a helper to write synthetic data to h5ad file.

Usage

write_h5ad_sc(f_path, counts, obs, var, overwrite = TRUE, .verbose = TRUE)

Arguments

f_path

String. The filepath to which to save the data

counts

Sparse matrix. Needs to be of class dgRMatrix or dgCMatrix.

obs

data.table. The observations. Needs to have nrow(obs) == nrow(counts).

var

data.table. The variable data. Needs to have ncol(var) == ncol(counts).

overwrite

Boolean. Shall any found h5ad file be overwritten.

.verbose

Boolean. Controls verbosity of the function.

Value

Returns invisible