Calculate the effect size

Usage

hedges_g_dge(
  meta_data,
  main_contrast,
  normalised_counts,
  contrast_list = NULL,
  .verbose = TRUE
)

meta_data: data.table. The meta information about the experiment in which the contrast info can be found.
main_contrast: String. Which column contains the main groups you want to calculate the Hedge's G effect for. Every permutation of the groups will be tested if contrast_list is NULL.
normalised_counts: Numeric Matrix. The normalized count matrix.
contrast_list: String vector or NULL. Optional string vector of contrast formatted as "contrast1-contrast2". Default NULL will create all contrasts automatically.
.verbose: Boolean. Controls the verbosity of the function.

A data.table with the effect sizes and standard errors based on the Hedge's G effect size for the groups.